Papers
Salt-independent counterion kinetics and sub-Poisson number fluctuations in B-DNA from microsecond molecular dynamics. The Journal of Chemical Physics, 2026-05-21. Masato Tanigawa, Takafumi Iwaki.
Current Status of Generative Artificial Intelligence Utilization in Medical Education: A Cross-Sectional Survey of Medical Students and Faculty
Shigeo Ninomiya, Kyoko Yamamoto, Eiko Mieno, Hirofumi Anai, Naoto Uemura, Takashi Kobayashi, Masato Tanigawa, Takashi Hirano, Isao Saito, Toshikatsu Hanada …
JMA Journal 9(4) 2026年4月24日
Reproducible Adaptive MCMC via Sharing a Pretrained Generator Matrix across Runs and Structures. Journal of Chemical Information and Modeling, 2026-04-13. Masato Tanigawa, Takafumi Iwaki.
Paradoxical G-quadruplex distribution in coronavirus genomes reveals functional constraints and antiviral therapeutic opportunities. Virus Research, 2026-02. Masato Tanigawa, Takafumi Iwaki.
Development and validation of a machine learning model to predict time to renal replacement therapy in patients with chronic kidney disease.
Jun Okita, Takeshi Nakata, Hiroki Uchida, Akiko Kudo, Akihiro Fukuda, Tamio Ueno, Masato Tanigawa, Noboru Sato, Hirotaka Shibata
BMC nephrology 25(1) 101-101 2024年3月16日
Histological classification of Japanese IgA nephropathy with a small number of glomeruli using Bayes' theorem.
Takeshi Nakata, Masato Tanigawa, Akihiro Fukuda, Hirotaka Shibata
Scientific reports 13(1) 18663-18663 2023年10月31日
Glycosylation and methylation of quercetin and myricetin by cultured cells of phytolacca Americana. Natural Product Communications 12(4) 523-524 2017. Yuya Fujitaka, Kei Shimoda, Naoji Kubota, Minami Araki, Tatsuya Onishi, Noriyuki Nakayama, Kohji Ishihara, Masato Tanigawa , Hatsuyuki Hamada, Hiroki Hamada
Glycosylation of chrysin by cultured cells of eucalyptus perriniana. Natural Product Communications 11(8) 1097-1098 2016. Kei Shimoda, Naoji Kubota, Masato Tanigawa , Hiroki Hamada.
Hydroxylation and glycosylation of phenylpropanoids by cultured cells of Phytolacca americana. Natural Product Communications 11(2) 197-198 2016. Kei Shimoda, Naoji Kubota, Daisuke Uesugi, Masato Tanigawa , Hiroki Hamada
Synthesis and pharmacological evaluation of glycosides of resveratrol, pterostilbene, and piceatannol. Annals of the New York Academy of Sciences 1348 141-149 2015. Kei Shimoda, Naoji Kubota, Daisuke Uesugi, Hatsuyuki Hamada, Masato Tanigawa , Hiroki Hamada.
Regioselective Glycosylation of 3-, 5-, 6-, and 7-Hydroxyflavones by Cultured Plant Cells. Natural product communications 10 923-924 2015. Kei Shimoda, Naoji Kubota, Daisuke Uesugi, Yuuya Fujitaka, Shouta Okada, Masato Tanigawa , Hiroki Hamada.
Glycosylation of quercetin with cultured plant cells and cyclodextrin glucanotransferase. Natural Product Communications 9 647-648 2014. Kei Shimoda, Naoji Kubota, Manabu Hamada, Daisuke Uesugi, Masato Tanigawa , Hatsuyuki Hamada, Hiroki Hamada.
Downregulation of SAV1 plays a role in pathogenesis of high-grade clear cell renal cell carcinoma. BMC Cancer 11 523 2011. Keiko Matsuura, Chisato Nakada, Mizuho Mashio, Takahiro Narimatsu, Takahiro Narimatsu, Taichiro Yoshimoto, Taichiro Yoshimoto, Masato Tanigawa , Yoshiyuki Tsukamoto, Naoki Hijiya, Ichiro Takeuchi, Takeo Nomura, Fuminori Sato, Hiromitsu Mimata, Masao Seto, Masatsugu Moriyama, Masatsugu Moriyama.
MicroRNA-375 is down-regulated in gastric carcinomas and regulates cell survival by targeting PDK1 and 14-3-3ζ. Cancer Research 70:2339-2349, 2010. Tsukamoto Y, Nakada C, Noguchi T, Tanigawa M, Tung NL, Uchida T, Hijiya N, Matsuura K, Fujioka T, Seto M, Moriyama M
Genomic profiling of gastric carcinoma in situ and adenomas by array-based comparative genomic hybridization. J. Pathol. 221: 96-105, 2010. Uchida M, Tsukamoto Y, Uchida T, Ishikawa Y, Nagai T, Hijiya N, Nguyen LT, Nakada C, Kuroda A, Okimoto T, Kodama M, Murakami K, Noguchi T, Matsuura K, Tanigawa M, Seto M, Ito H, Fujioka T, Takeuchi I, Moriyama M.
A novel diagnostic monoclonal antibody specific for Helicobacter pylori CagA of East Asian type. APMIS 117: 893-899, 2009 Yasuda A, Uchida T, Tung NL, Kawazato H, Tanigawa M, Murakami K, Kishida T, Fujioka T, Moriyama M
Genome-wide microRNA expression profiling in renal cell carcinoma: significant downregulation of miR-141 and miR-200c. J. Pathol. 216: 418-427, 2008 Nakada C, Matsuura K, Tsukamoto Y, Tanigawa M, Yoshimoto T, Narimatsu T, Nguyen LT, Hijiya N, Uchida T, Sato F, Mimata H, Seto M, Moriyama M
Genome-wide analysis of DNA copy number alterations and gene expression in gastric cancer. J. Pathol. 216: 471-482, 2008. Tsukamoto Y, Uchida T, Karnan S, Noguchi T, Nguyen LT, Tanigawa M, Takeuchi I, Matsuura K, Hijiya N, Nakada C, Kishida T, Kawahara K, Ito H, Murakami K, Fujioka T, Seto M, Moriyama M
High-resolution analysis of DNA copy number alterations and gene expression in renal clear cell carcinoma. J. Pathol. 213:392-401, 2007 Yoshimoto T, Matsuura K, Karnan S, Tagawa H, Nakada C, Tanigawa M, Tsukamoto Y, Uchida T, Kashima K, Akizuki S, Takeuchi I, Sato F, Mimata H, Seto M, Moriyama M
Electrooptics of beta-FeOOH particle in aqueous media 2. Field-strength dependence of decay and steady-state birefringence, and the hydrodynamic and electrooptic properties. J. Colloid Interface Sci. 295:445-456, 2006. Peikov V, Sasai R, Tanigawa M, Petkanchin I, Yamaoka K
Effect of potential scan rate on electro-redox reaction in ultrasonic vibrating electrode-voltammetry. Anal. Lett. 36:2539-2550, 2003. Kubota N, Tanigawa M, Shimoda K, Fujii S, Tatsumoto N, Sano T
Detection and mapping of mismatched base pairs in DNA molecules by atomic force microscopy. Nucleic Acids Res. 28:E38, 2000 Tanigawa M, Gotoh M, Machida M, Okada T, Oishi M.
Carbon-nanotube tip for highly-reproducible imaging of deoxyribonucleic acid helical turns by noncontact atomic force microscopy. Jpn. J. Appl. Phys. 39:887-889, 2000. Uchihashi T,Choi N,Tanigawa M,Ashino M,Sugawara Y,Nishijima H,Akita, S,Nakayama Y,Yokoyama K,Morita S,Ishikawa M
Identification of B-Form DNA in an ultrahigh vacuum by noncontact-mode atomic force microscopy. Langmuir 16: 1349-1353, 2000. Uchihashi T, Tanigawa M,Ashino M, Sugawara Y,Yokoyama K, Morita S,Ishikawa M
Atomic force microscopy of supercoiled DNA structure on mica. Anal. Chim. Acta 365:19-25, 1998. Tanigawa M,Okada T
A sensitive and rapid method for mapping protein bound to DNA by atomic force microscopy. Biosci. Biotech. Biochem. 61:1751-1753, 1997. Tanigawa M, Machida M, Okada T
Changes in molecular weights and molecular weight distributions of differently stranded nucleic acids after sonication: Gel permeation chromatography / low angle laser light scattering evaluation and computer simulation. Macromolecules 29:7418-7425, 1996. Tanigawa M, Suzuto M, Fukudome K, Yamaoka K
Electro-optical and hydrodynamic properties of synthetic polyribonucleotides in solutions as studied by electric birefringence. Bull. Chem. Soc. Jpn. 68:481-492, 1995. Tanigawa M, Yamaoka K
Electric birefringence and electric dichroism study of the chromatin structure and ultrasonic effect on polynucleosome in solution. Journal of Science of the Hiroshima University Series A 59:165-210, 1995.Tanigawa M
Molecular weight distribution and intrinsic viscosity of sonicated and successively fractionated double-stranded deoxyribonucleic acid and polyribonucleotides. Polym. J. 26:291-302, 1994. Tanigawa M, Mukaiyama N, Shimokubo S, Wakabayashi K, Fujita Y, Fukudome K, Yamaoka K
Reversing-pulse electric birefringence of disklike suspension in the low electric field region : An extension of the ion-fluctuation model. J. Chem. Phys. 101:1625-1631, 1994. Yamaoka K, Tanigawa M, Sasai R
A Predictive Model of the Time to ESKD Using Machine Learning
Jun Okita, Takeshi Nakata, Emiko Noguchi, Nobuchika Koumatsu, Ayako Tasaki, Hiroki Uchida, Akiko Kudo, Akihiro Fukuda, Masato Tanigawa, Hirotaka Shibata
American Society of Nephrogy 2022年11月
IgA腎症組織学的重症度分類におけるベイズの定理を用いた事前確率分析法の検討
中田 健, 青木 宏平, 福田 顕弘, 福長 直也, 谷川 雅人, 柴田 洋孝
日本腎臓学会誌 62(4) 319-319 2020年7月
Analysis of Japanese Histological IgA Classification Using Probabilistic Analysis Associated with the Bayesian Theorem
Takeshi Nakata, Kohei Aoki, Akihiro Fukuda, Naoya Fukunaga, Tanigawa Masato, Hirotaka Shibata
American Society of Nephrogy 2019年11月
原子間力顕微鏡を用いたDNA点変異部位検出法
谷川 雅人, 後藤 雅式, 岡田 孝夫
生物物理 38(2) S119 1998年9月7日
光ピンセットを用いたDNAループの検出と測定
十川 久美子, 倉知 正, 根本 知己, 十川 和博, 藤井 義明, 谷川 雅人, 岡田 孝夫, 田代 英夫
生物物理 37 S40 1997年10月
原子間力顕微鏡によるSp1-DNA複合体の観察
谷川 雅人, 町田 雅之, 十川 久美子, 田代 英夫, 岡田 孝夫
生物物理 37 S40 1997年10月
A Bayesian Network Method for Determining Causality of Clinical Test Data and Assessing Disease Progression. Japan Society for the Promotion of Science, Grant 24K15812, 2024-04-01–2028-03-31.
The method to determine the probability of disease severity by bayesian statistical analysis in a small number of patient data. Japan Society for the Promotion of Science, Grant 20K12716, 2020-04-01–2024-03-31.
Single molecule observation and theoretical study of higher order structural change of DNA accompanied by DNA quadruplex formation. Japan Society for the Promotion of Science, Grant 17K05013, 2017-04-01–2021-03-31.
Kinetics amd mechanism of conformational changes of nucleic acids by interaction with small molecules. Japan Society for the Promotion of Science, Grant 25330338, 2013-04-01–2016-03-31.
新聞発表(News paper)
原子間力顕微鏡によるDNA―蛋白質結合部位の特定法の開発 ISOTOPE NEWS 3月号, 1997.
その他(Publicatins)
原子間力顕微鏡によるDNA―蛋白質結合部位の特定法の開発 ISOTOPE NEWS 3月号, 1997.
原子間力顕微鏡によるDNA研究の現状 蛋白質・核酸・酵素 43: 805-811, 1998.
谷川先生の項目に掲載済みの共同論文は、重複を避けるためそちらにまとめています。 / Shared papers already listed under Masato Tanigawa are not repeated here.
Evaluation of mode mixing in the efficiency of Markov chain Monte Carlo simulations.
Takafumi Iwaki, Masato Tanigawa
AIP Advances, 2025-03-01.
Enzymatic Synthesis of alpha-Tocopherol Derivative Glycoside, Daidzein Glycoside, Daidzein Oligosaccharide, Resveratrol Oligosaccharide, and Curcumin Oligosaccharides and Their Anti-Allergic Activity and Neuroprotective Activity
Hiroki Hamada, Hatsuyuki Hamada, Kohji Ishihara, Atsuhito Kuboki, Takafumi Iwaki, Yuya Kiriake
NATURAL PRODUCT COMMUNICATIONS 16(10) 2021年10月
Resveratrol Oligosaccharides (Gluco-Oligosaccharides) Effectively Inhibit SARS-CoV-2 Infection: Glycoside (Polysaccharide) Approach for Treatment of COVID-19
Hiroki Hamada, Hatsuyuki Hamada, Kei Shimoda, Atsuhito Kuboki, Takafumi Iwaki, Yuya Kiriake, Kohji Ishihara
NATURAL PRODUCT COMMUNICATIONS 16(5) 2021年5月
Synthesis of Ester-Linked Paclitaxel–Glycoside Conjugate and Its Drug Delivery System Using Hybrid-Bio-Nanocapsules Targeted With Trastuzumab
Yuya Fujitaka, Hiroki Hamada, Hatsuyuki Hamada, Kohji Ishihara, Takafumi Iwaki, Kei Shimoda, Yuya Kiriake, Tomohiro Saikawa
Natural Product Communications 16(1) 2021年1月29日
Synthesis of Daidzein Glycosides, α-Tocopherol Glycosides, Hesperetin Glycosides by Bioconversion and Their Potential for Anti-Allergic Functional-Foods and Cosmetics.
Yuya Fujitaka, Hiroki Hamada, Daisuke Uesugi, Atsuhito Kuboki, Kei Shimoda, Takafumi Iwaki, Yuya Kiriake, Tomohiro Saikawa
Molecules (Basel, Switzerland) 24(16) 2019年8月16日
Chemo-enzymatic Synthesis of Ester-Linked Docetaxel-Glycoside Conjugate and its Drug Delivery System Using Hybrid-Bio-Nanocapsules Targeted With Trastuzumab and Cetuximab
Yuya Fujitaka, Hiroki Hamada, Hatsuyuki Hamada, Noriyoshi Masuoka, Kei Shimoda, Daisuke Uesugi, Takafumi Iwaki, Atsuhito Kuboki, Kohji Ishihara, Yuya Kiriake
Natural Product Communications 14(6) 2019年6月26日
Stretching of single DNA molecules caused by accelerating flow on a microchip
Hirano Ken, Iwaki Takafumi, Ishido Tomomi, Yoshikawa Yuko, Naruse Keiji, Yoshikawa Kenichi
JOURNAL OF CHEMICAL PHYSICS 149(16) 165101-165101 2018年10月28日
Tooth germ invagination from cell-cell interaction: Working hypothesis on mechanical instability
Hisako Takigawa-Imamura, Ritsuko Morita, Takafumi Iwaki, Takashi Tsuji, Kenichi Yoshikawa
JOURNAL OF THEORETICAL BIOLOGY 382 284-291 2015年10月
Marked difference in conformational fluctuation between giant DNA molecules in circular and linear forms
Takafumi Iwaki, Tomomi Ishido, Ken Hirano, Alexei A. Lazutin, Valentina V. Vasilevskaya, Takahiro Kenmotsu, Kenichi Yoshikawa
JOURNAL OF CHEMICAL PHYSICS 142(14) 145101-145101 2015年4月
Controlling negative and positive photothermal migration of centimeter-sized droplets
Masatoshi Ichikawa, Fumi Takabatake, Keitaro Miura, Takafumi Iwaki, Nobuyuki Magome, Kenichi Yoshikawa
PHYSICAL REVIEW E 88(1) 012403-012403 2013年7月
Probability of double-strand breaks in genome-sized DNA by gamma-ray decreases markedly as the DNA concentration increases
Shunsuke F. Shimobayashi, Takafumi Iwaki, Toshiaki Mori, Kenichi Yoshikawa
JOURNAL OF CHEMICAL PHYSICS 138(17) 174907-174907 2013年5月
Negative photophoresis of smoke particles observed under microgravity
Shun N. Watanabe, Takafumi Iwaki, Masahiro I. Kohira, Nobuyuki Magome, Kenichi Yoshikawa
CHEMICAL PHYSICS LETTERS 511(4-6) 447-451 2011年8月
Confinement causes opposite effects on the folding transition of a single polymer chain depending on its stiffness
Yuji Higuchi, Kenichi Yoshikawa, Takafumi Iwaki
PHYSICAL REVIEW E 84(2) 021924-021924 2011年8月
How the Circular and Linear Conformational Fluctuations of Giant DNA Molecules Change with the Viscosity of the Solvent
Masato Tanigawa, Takafumi Iwaki
Biophysical Journal 120(3) 221a-221a 2021年2月
17pPSA-59 局所的に加熱された液滴の前進運動と後退運動
市川 正敏, 岩城 貴史, 高畠 芙美, 吉川 研一
日本物理学会講演概要集 70 2710-2710 2015年
17pPSB-24 線状/環状DNA分子の動的構造揺らぎの分析
岩城 貴史, 石堂 智美, Hirano K, Lazutin Alexei, Vasilevskaya Valentina, 剣持 貴弘, 吉川 研一
日本物理学会講演概要集 70 2015年
30aPS-51 ライデンフロスト効果とベナール対流の協奏 : 水-エタノール系の自発的界面振動(30aPS 領域11ポスターセッション,領域11(物性基礎論・統計力学・流体物理・応用数学・社会経済物理))
岩城 貴史, 松浦 弘智, 吉川 研一
日本物理学会講演概要集 69(1) 371-371 2014年3月5日
27pAR-9 一分子長鎖DNAのブラウン運動 : 線状・環状分子の比較(27pAR 領域11,領域12合同 生物合同セッション2,領域11(物性基礎論・統計力学・流体物理・応用数学・社会経済物理))
剣持 貴弘, 吉川 研一, 石堂 智美, 平野 研, 岩城 貴史
日本物理学会講演概要集 69 2014年
Probability of Double-Strand Breaks in Genome-Sized DNA by gamma-Ray Decreases Markedly as the DNA Concentration Increases
Shunsuke Shimobayashi, Takafumi Iwaki, Toshiaki Mori, Kenichi Yoshikawa
BIOPHYSICAL JOURNAL 104(2) 178A-178A 2013年1月
19pAJ-7 DNA二重鎖切断の定量的計測と理論モデルの構築 : 生体内作用の解明を目指して(19pAJ 放射線物理(放射線損傷・放射線計測・二次電子放出),領域1(原子・分子,量子エレクトロニクス,放射線物理))
下林 俊典, 岩城 貴史, 森 利明, 吉川 研一
日本物理学会講演概要集 67(2) 151-151 2012年8月24日
3C1110 The probability of double-strand breaks in genome-sized DNA decreases markedly as the DNA concentration increases(Nucleic Acids,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)
Shimobayashi Shunsuke, Iwaki Takafumi, Mori Toshiaki, Yoshikawa Kenichi
生物物理 52 S61 2012年
歯の発生過程における座屈モデル:細胞間力学作用が創り出す形態形成の道筋
今村(滝川)寿子, 森田梨津子, 岩城貴史, 辻孝, 吉川研一
日本分子生物学会年会プログラム・要旨集(Web) 35th 2012年
22pPSB-60 レーザー照射によって誘起された液滴の並進運動と運動モード分岐(22pPSB 領域11ポスターセッション,領域11(統計力学,物性基礎論,応用数学,力学,流体物理))
市川 正敏, 岩城 貴史, 三浦 啓太朗, 馬籠 信之, 吉川 研一
日本物理学会講演概要集 66(2) 261-261 2011年8月24日
28aPS-72 レーザー照射によって誘起された液滴の運動(28aPS ポスターセッション,領域11(統計力学,物性基礎論,応用数学,力学,流体物理))
市川 正敏, 岩城 貴史, 三浦 啓太朗, 馬籠 信之
日本物理学会講演概要集 66(1) 363-363 2011年3月3日
A Toroidally Folded Monomolecular DNA Chain : From the perspective of colloidal physics(Poster session 2, New Frontiers in Colloidal Physics : A Bridge between Micro- and Macroscopic Concepts in Soft Matter) :
Iwaki Takafumi, Makita Naoko, Yoshikawa Kenichi
物性研究 89(1) 134-135 2007年
煙液滴の光逆泳動速度の光強度依存性
渡邊 俊, 吉川 研一, 岩城 貴史, 小平 將裕, 馬籠 信之, Watanabe Shun N., Yoshikawa Kenichi, Iwaki Takafumi, Kohira Masahiro I., Magome Nobuyuki
宇宙利用シンポジウム = Space Utilization Research: Proceedings of Space Utilization Symposium (22) 2006年3月
21aXG-3 集光レーザービーム中の光逆泳動(化学物理一般,光応答・光散乱,量子系・電子状態,領域12(ソフトマター物理,化学物理,生物物理))
渡邉 俊, 岩城 貴史, 小平 將裕, 馬籠 信之
日本物理学会講演概要集 60 239-239 2005年
『細胞の自己組織化”に物理の視点から迫る』
吉川研一, 岩城貴史
パリティ, 26(5) 13-21. 2011年